A diagnostic real-time PCR assay for the rapid identification of the tomato-potato psyllid, Bactericera cockerelli (Sulc, 1909) and development of a psyllid barcoding database

The accurate and rapid identification of insect pests is an important step in the prevention and control of outbreaks in areas that are otherwise pest free. The potato-tomato psyllid Bactericera cockerelli (Sulc, 1909) is the main vector of 'Candidatus Liberibacter solanacearum' on potato and tomato crops in North America and New Zealand; and is considered a threat for introduction in Europe and other pest-free regions. This study describes the design and validation of the first species-specific TaqMan probe-based real-time PCR assay, targeting the ITS2 gene region of B. cockerelli. The assay detected B. cockerelli genomic DNA from adults, immatures, and eggs, with 100% accuracy. This assay also detected DNA from cloned plasmids containing the ITS2 region of B. cockerelli with 100% accuracy. The assay showed 0% false positives when tested on genomic and cloned DNA from 73 other psyllid species collected from across Europe, New Zealand, Mexico and the USA. This included 8 other species in the Bactericera genus and the main vectors of 'Candidatus Liberibacter solanacearum' worldwide. The limit of detection for this assay at optimum conditions was 0.000001ng DNA (similar to 200 copies) of ITS2 DNA which equates to around a 1:10000 dilution of DNA from one single adult specimen. This assay is the first real-time PCR based method for accurate, robust, sensitive and specific identification of B. cockerelli from all life stages. It can be used as a surveillance and monitoring tool to further study this important crop pest and to aid the prevention of outbreaks, or to prevent their spread after establishment in new areas

Assessment of the 2016 National Institute for Health and Care Excellence high-sensitivity troponin rule-out strategy.

OBJECTIVE: We aimed to evaluate the limit of detection of high-sensitivity troponin (hs-cTn) and Thrombolysis In Myocardial Infarction (TIMI) score combination rule-out strategy suggested within the 2016 National Institute for Health and Care Excellence (NICE) Chest Pain of Recent Onset guidelines and establish the optimal TIMI score threshold for clinical use. METHODS: A pooled analysis of adult patients presenting to the emergency department with chest pain and a non-ischaemic ECG, recruited into six prospective studies, from Australia, New Zealand and the UK. We evaluated the sensitivity of TIMI score thresholds from 0 to 2 alongside hs-cTnT or hs-cTnI for the primary outcome of major adverse cardiac events within 30 days. RESULTS: Data were available for 3159 patients for hs-cTnT and 4532 for hs-cTnI, of these 376 (11.9%) and 445 (9.8%) had major adverse cardiac events, respectively. Using a TIMI score of 0, the sensitivity for the primary outcome was 99.5% (95% CI 98.1% to 99.9%) alongside hs-cTnT and 98.9% (97.4% to 99.6%)%) alongside hs-cTnI, identifying 17.9% and 21.0% of patients as low risk, respectively. For a TIMI score ≤1 sensitivity was 98.9% (97.3% to 99.7%)%) alongside hs-cTnT and 98.4% (96.8% to 99.4%)%) alongside hs-cTnI, identifying 28.1% and 35.7% as low risk, respectively. For TIMI≤2, meta-sensitivity was <98% with either assay. CONCLUSIONS: Our findings support the rule-out strategy suggested by NICE. The TIMI score threshold suggested for clinical use is 0. The proportion of patients identified as low risk (18%-21%) and suitable for early discharge using this threshold may be sufficient to encourage change of practice. TRIAL REGISTRATION NUMBERS: ADAPT observational study/IMPACT intervention trial ACTRN12611001069943.ADAPT-ADP randomised controlled trial ACTRN12610000766011.EDACS-ADP randomised controlled trial ACTRN12613000745741.TRUST observational study ISRCTN no. 21109279

An extreme proto-cluster of luminous dusty starbursts in the early Universe

We report the identification of an extreme proto-cluster of galaxies in the early Universe whose core (nicknamed Distant Red Core, DRC) is formed by at least ten dusty star-forming galaxies (DSFGs), confirmed to lie at $z_{\rm spec} = 4.002$ via detection of [CI](1-0), $^{12}$CO(6-5), $^{12}$CO(4-3), $^{12}$CO(2-1) and ${\rm H_2O} (2_{11} - 2_{02})$ emission lines, detected using ALMA and ATCA. The spectroscopically-confirmed components of the proto-cluster are distributed over a ${\rm 260\, kpc \times 310\, kpc}$ region and have a collective obscured star-formation rate (SFR) of $\sim 6500 \, M_\odot \, {\rm yr}^{-1}$, considerably higher than has been seen before in any proto-cluster of galaxies or over-densities of DSFGs at $z \gtrsim 4$. Most of the star formation is taking place in luminous DSFGs since no Ly$\alpha$ emitters are detected in the proto-cluster core, apart from a Ly$\alpha$ blob located next to one of the DRC dusty components and extending over $60\,{\rm kpc}$. The total obscured SFR of the proto-cluster could rise to ${\rm SFR} \sim 14,400 \, M_\odot \, {\rm yr}^{-1}$ if all the members of an over-density of bright DSFGs discovered around DRC in a wide-field LABOCA 870-$\mu$m image are part of the same structure. The total halo mass of DRC could be as high as $\sim 4.4 \times 10^{13}\,M_\odot$ and could be the progenitor of a Coma-like cluster at $z = 0$. The relatively short gas-depletion times of the DRC components suggest either the presence of a mechanism able to trigger extreme star formation simultaneously in galaxies spread over a few hundred kpc or the presence of gas flows from the cosmic web able to sustain star formation over several hundred million years.Comment: Submitted to ApJ. Minor updates added, including a change of the source name. Comments welcom

Spectral aerosol extinction (SpEx): a new instrument for in situ ambient aerosol extinction measurements across the UV/visible wavelength range

We introduce a new instrument for the measurement of in situ ambient aerosol extinction over the 300– 700 nm wavelength range, the spectral aerosol extinction (SpEx) instrument. This measurement capability is envisioned to complement existing in situ instrumentation, allowing for simultaneous measurement of the evolution of aerosol optical, chemical, and physical characteristics in the ambient environment. In this work, a detailed description of the instrument is provided along with characterization tests performed in the laboratory. Measured spectra of NO2 and polystyrene latex spheres (PSLs) agreed well with theoretical calculations. Good agreement was also found with simultaneous aerosol extinction measurements at 450, 530, and 630 nm using CAPS PMex instruments in a series of 22 tests including nonabsorbing compounds, dusts, soot, and black and brown carbon analogs. SpEx measurements are expected to help identify the presence of ambient brown carbon due to its 300 nm lower wavelength limit compared to measurements limited to longer UV and visible wavelengths. Extinction spectra obtained with SpEx contain more information than can be conveyed by a simple power law fit (typically represented by Ångström exponents). Planned future improvements aim to lower detection limits and ruggedize the instrument for mobile operation

H-ATLAS: a candidate high redshift cluster/protocluster of star-forming galaxies

We investigate the region around the Planck-detected z=3.26 gravitationally lensed galaxy HATLAS J114637.9-001132 (hereinafter HATLAS12-00) using both archival Herschel data from the H-ATLAS survey and using submm data obtained with both LABOCA and SCUBA2. The lensed source is found to be surrounded by a strong overdensity of both Herschel-SPIRE sources and submm sources. We detect 17 bright (S870 >~7 mJy) sources at >4sigma closer than 5 arcmin to the lensed object at 850/870 microns. Ten of these sources have good cross-identifications with objects detected by Herschel-SPIRE which have redder colours than other sources in the field, with 350 micron flux > 250 micron flux, suggesting that they lie at high redshift. Submillimeter Array (SMA) observations localise one of these companions to ~1 arcsecond, allowing unambiguous cross identification with a 3.6 and 4.5 micron Spitzer source. The optical/near-IR spectral energy distribution (SED) of this source is measured by further observations and found to be consistent with z>2, but incompatible with lower redshifts. We conclude that this system may be a galaxy cluster/protocluster or larger scale structure that contains a number of galaxies undergoing starbursts at the same time

Paedophiles in the community: inter-agency conflict, news leaks and the local press

This article explores the leaking of confidential information about secret Home Office plans to house convicted paedophiles within a local community (albeit inside a prison). It argues that a politics of paedophilia has emerged in which inter-agency consensus on the issue of ‘what to do’ with high-profile sex offenders has broken down. Accordingly, the article situates newspaper ‘outing’ of paedophiles in the community in relation to vigilante journalism and leaked information from official agencies. The article then presents research findings from a case study of news events set in train following a whistle-blowing reaction by Prison Officers’ Association officials to Home Office plans. Drawing from a corpus of 10 interviews with journalists and key protagonists in the story, the article discusses both the dynamics of whistle blowing about paedophiles and also what happens after the whistle has blown

A "superstorm": When moral panic and new risk discourses converge in the media

This is an Author's Accepted Manuscript of an article published in Health, Risk and Society, 15(6), 681-698, 2013, copyright Taylor & Francis, available online at: http://www.tandfonline.com/10.1080/13698575.2013.851180.There has been a proliferation of risk discourses in recent decades but studies of these have been polarised, drawing either on moral panic or new risk frameworks to analyse journalistic discourses. This article opens the theoretical possibility that the two may co-exist and converge in the same scare. I do this by bringing together more recent developments in moral panic thesis, with new risk theory and the concept of media logic. I then apply this theoretical approach to an empirical analysis of how and with what consequences moral panic and new risk type discourses converged in the editorials of four newspaper campaigns against GM food policy in Britain in the late 1990s. The article analyses 112 editorials published between January 1998 and December 2000, supplemented with news stories where these were needed for contextual clarity. This analysis shows that not only did this novel food generate intense media and public reactions; these developed in the absence of the type of concrete details journalists usually look for in risk stories. Media logic is important in understanding how journalists were able to engage and hence how a major scare could be constructed around convergent moral panic and new risk type discourses. The result was a media ‘superstorm’ of sustained coverage in which both types of discourse converged in highly emotive mutually reinforcing ways that resonated in a highly sensitised context. The consequence was acute anxiety, social volatility and the potential for the disruption of policy and social change

On the statistics of proto-cluster candidates detected in the Planck all-sky survey

Observational investigations of the abundance of massive precursors of local galaxy clusters ("proto-clusters") allow us to test the growth of density perturbations, to constrain cosmological parameters that control it, to test the theory of non-linear collapse and how the galaxy formation takes place in dense environments. The Planck collaboration has recently published a catalogue of >~ 2000 cold extra-galactic sub-millimeter sources, i.e. with colours indicative of z >~ 2, almost all of which appear to be over-densities of star-forming galaxies. They are thus considered as proto-cluster candidates. Their number densities (or their flux densities) are far in excess of expectations from the standard scenario for the evolution of large-scale structure. Simulations based on a physically motivated galaxy evolution model show that essentially all cold peaks brighter than S_545GHz = 500 mJy found in Planck maps after having removed the Galactic dust emission can be interpreted as positive Poisson fluctuations of the number of high-z dusty proto-clusters within the same Planck beam, rather then being individual clumps of physically bound galaxies. This conclusion does not change if an empirical fit to the luminosity function of dusty galaxies is used instead of the physical model. The simulations accurately reproduce the statistic of the Planck detections and yield distributions of sizes and ellipticities in qualitative agreement with observations. The redshift distribution of the brightest proto-clusters contributing to the cold peaks has a broad maximum at 1.5 <~ z <~ 3. Therefore follow-up of Planck proto-cluster candidates will provide key information on the high-z evolution of large scale structure

Migrant family display: a strategy for achieving recognition and validation in the host country

This article draws on the narratives of 10 migrant families living in a predominantly White British northern UK city, Hull, and brings together the typically distinct fields of the sociology of family, transnational family studies and migration studies. By uniquely applying the lens of family display to migrant family accounts, this article offers a timely new way to understand the strategies migrant families employ when negotiating recognition and validation in an increasingly globalised world. Existing applications of family display focus on what might be referred to as unconventional families: same-sex couples, dual-heritage families, single-parent households, and families living in commercial homes. Furthermore, previous migration studies consider the strategies employed by migrant individuals, sometimes within a family, but do not do so through the lens of family display. The concept has not, then, been applied to migrant families and their everyday lives, and with a specific focus on understanding the influence of audience in family display. This article, therefore, contributes to migration and transnational family studies by providing a new way of understanding migrant family lives, and also advancing the concept of family display in three clear ways: by showing that migrant families do display family to audiences beyond the family–including the State–so as to present as a ‘legitimate’ family; by expanding understanding of how family display is enacted; and by arguing that broader narratives influence those related to ‘family’ and impact on how and why migrant families engage in family displays

PUF60 variants cause a syndrome of ID, short stature, microcephaly, coloboma, craniofacial, cardiac, renal and spinal features.

PUF60 encodes a nucleic acid-binding protein, a component of multimeric complexes regulating RNA splicing and transcription. In 2013, patients with microdeletions of chromosome 8q24.3 including PUF60 were found to have developmental delay, microcephaly, craniofacial, renal and cardiac defects. Very similar phenotypes have been described in six patients with variants in PUF60, suggesting that it underlies the syndrome. We report 12 additional patients with PUF60 variants who were ascertained using exome sequencing: six through the Deciphering Developmental Disorders Study and six through similar projects. Detailed phenotypic analysis of all patients was undertaken. All 12 patients had de novo heterozygous PUF60 variants on exome analysis, each confirmed by Sanger sequencing: four frameshift variants resulting in premature stop codons, three missense variants that clustered within the RNA recognition motif of PUF60 and five essential splice-site (ESS) variant. Analysis of cDNA from a fibroblast cell line derived from one of the patients with an ESS variants revealed aberrant splicing. The consistent feature was developmental delay and most patients had short stature. The phenotypic variability was striking; however, we observed similarities including spinal segmentation anomalies, congenital heart disease, ocular colobomata, hand anomalies and (in two patients) unilateral renal agenesis/horseshoe kidney. Characteristic facial features included micrognathia, a thin upper lip and long philtrum, narrow almond-shaped palpebral fissures, synophrys, flared eyebrows and facial hypertrichosis. Heterozygote loss-of-function variants in PUF60 cause a phenotype comprising growth/developmental delay and craniofacial, cardiac, renal, ocular and spinal anomalies, adding to disorders of human development resulting from aberrant RNA processing/spliceosomal function